BlastStation2 Help
Welcome
Introduction to BlastStation
FASTA data input
Job submission
How to read results
Remote BLAST Search
EBI NCBI-Blast
EBI WU-Blast2
Local BLAST Search
Download database
Create database
BLAST machine selection
Instructions in detail
Delete jobs
Backup jobs
Restore jobs
Remove database
Search parameters settings
Navigation in result window
Export search results
Export FASTA data
Preference settings
Data directory
Menu Reference
File menu
Edit menu
Job menu
Tools menu
Help menu
How to read results
When BLAST search is finished, the following dialog will be displayed.
Let's click "Yes" to see search results.
Bar graph is shown on the upper half. The color of the bar is classified by the identity. Red is 100%, purple is 90% or more, and so on. The length of the query sequence (606 in this case) is given above the black bar at the top. You can easily understand which portion of the subject sequence matches with the query sequence. Move your mouse cursor on the bars. The color of the bar changes and four numbers will be displayed as shown below. The sequence from 19 to 572 of query sequence match with that from 2 to 552 of AY661748.
Table is shown on the lower half, which consists of ID, Accession number, Definition, length, bit score, E Value, and Identity.
In order to display the other search results, click arrows below.
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Previous result |
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Next result |
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Fast backward |  |
Fast forward |
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First result |  |
Last result |
When you click "Jump", the window below will be shown. Description of each FASTA file will be listed in this window. Clicking each description will display corresponding search result. If you have many descriptions, type in search strings in the text field and click search button to narrow this list.
Display List menu will display Blast results file in the default browser.
