BlastStation: Products, BlastStation-Local64

BlastStation-Local64 is specialized to 64-bit local NCBI Blast+ or 64-bit local NCBI Blast search on your PC. BlastStation-Local64 provides 64-bit NCBI Blast+ or 64-bit local NCBI Blast search capability up to twice¹⁾ as fast as 32-bit NCBI Blast+ and NCBI Blast²⁾. You can use databases available from the NCBI ftp server and/or create databases from your FASTA files. BlastStation-Local64 also supports large virtual database to tie up multiple databases. For example, it enables blastp searches over nr.00, nr.01, nr.02, nr.03, and nr.04. BlastStation-Local64 automatically detects multi cores available and uses them for BLAST searches. BlastStation-Local64 is available for Mac OS X and 64-bit Windows VIsta, Windows 7.

¹⁾ Actual search speeds depend on the amount of memory your PC has and the database size used.

²⁾ Benchmark tests results on Mac OS X are here and on 64-bit Windows are here.

Features

Standalone BLAST search with 64-bit NCBI BLAST+ 2.2.25 on your Mac.
Standalone BLAST search with 64-bit NCBI BLAST 2.2.20 on your Windows PC.
Supports database alias file which ties up multiple individual databases to form a large virtual database.
Supports megablast as well as traditional blastn.
High performance standalone Blast search using automatically detected available multi cores on your PC.
Easy database download from the NCBI ftp server to your PC.
Easy database creation from your FASTA file.
Easy database creation from your FASTQ file (ver. 1.3 or later).
Easy database creation from compressed file (ver. 1.3 or later).
Database folder location can be changed (ver. 1.3 or later).
Easy multi-FASTA data search.
Easy management of BLAST search parameters, FASTA data and search results.
Graphical display of search results.
Summary table display of search results.
Export summary table in CSV format.
Export search results sequences in FASTA format.

Note: Search results of NCBI Blast+ is slightly different from those of NCBI Blast.

Click here for 14-day Free Trial