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What's New: |
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BlastStation-Workgroup
for Ubuntu Linux
is available. It
supports 64-bit
Ubuntu 10.04 or
11.10.
(3/9/2012)
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Multiple BlastStation-Workgroup
licenses have
been sold since its
release in November
2011. Due to
this popularity, we
decided to extend
introductory
discount period
until 3/31/2012.
Live demo is
available here and
trial is
available here.
(1/31/2012)
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BlastStation-Workgroup
version 1.1 is
released.
This is a bug fix
release.
(11/28/2011)
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We are pleased to
announce the release
of our new
product, BlastStation-Workgroup
version 1.0. BlastStation-Workgroup
is a web-based
64-bit local BlastStation designed for small
to mid-sized groups.
BlastStation-Workgroup
works in the
browser, however it works
just like desktop BlastStation
with the power of
HTML5 technology.
Furthermore, it
provides automatic
database
synchronization with
NCBI databases such
as nt or nr, search
result sharing and
local blast database
sharing with other
users in the
workgroup. Different from NCBI
wwwblast or
sequenceserver, BlastStation-Workgroup
has built-in job
scheduler, which means even
if multiple users
submit blast jobs at
once,
BlastStation-Workgroup
will not overload
the server and
perform blast
searches stably.
If you think NCBI or
EBI BLAST servers
are too restrictive
and/or too crowded
for your research
group, BlastStation-Workgroup
is the answer. BlastStation-Workgroup
sever
running on 2-core
iMac with 8GB memory
performs BLAST
searches almost as
fast as NCBI BLAST
server does.
Benchmark results
are available here.
Take a look at
product details
and experience the
next generation
BLAST at
Live demo.
(11/16/2011)
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BlastStation-Free
is back. BlastStation-Free
version
2.0 for Mac OS X is released. Please visit
the product
page for
details. (8/14/2011)
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All of
BlastStation
version 2.72, BlastStation-Local64
version 1.3,
and BlastStation-Local
version 1.5 for
Mac OS X work
fine on Mac OS X
10.7 Lion. If
you have any problem
with the previous
version of
BlastStation, please
upgrade. (7/21/2011)
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BlastStation-Local
version 1.5 for
Mac OS X is
released. New
features include 1)
Built-in NCBI BLAST
is upgraded to
2.2.25, the most
recent version of
NCBI BLAST. 2)
Creates database
from FASTQ as well
as FASTA file.
Plain, .gz, .Z, and
.zip text files are
accepted. 3)
Supports to change
database folder
location. 4)
Displays alignment
details. Please download it
from
here.
(7/12/2011)
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BlastStation-Local64
version 1.3 for
Mac OS X is
released. New
features include 1)
Built-in NCBI BLAST+
is upgraded to
2.2.25, the most
recent version of NCBI BLAST+. 2)
Creates database
from FASTQ as well
as FASTA file.
Plain, .gz, .Z, and
.zip text files are
accepted. 3)
Supports to change
database folder
location. 4)
Displays alignment
details. Please download it
from
here
for
14-day free trial.
(7/11/2011)
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BlastStation
version 2.72 for
Mac OS X is
released. New
features include 1)
Built-in NCBI BLAST
is upgraded to
2.2.25, the most
recent version of
NCBI BLAST. 2)
Creates database
from FASTQ as well
as FASTA file.
Plain, .gz, .Z, and
.zip text files are
accepted. 3)
Supports to change
database folder
location. 4)
Displays alignment
details. Please download it
from
here.
(7/11/2011)
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BlastStation-Local
was used to
examine gene
expression profiles
in control and
PCB-treated
killifish embryos by Biology Department, Woods Hole Oceanographic Institution
in
BMC Genomics 2011,
12:263
(6/3/2011)
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BlastStation-Local64
version 1.2 for
Windows is
released. This
is a specialized
version of
BlastStation-Local
for 64-bit Windows.
Please download it
from
here
for
14-day free trial.
(2/6/2011)
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BlastStation2 was
used for the
sequence analyses of
termites by
Department of
Entomology, Kansas
State University in
BMC
Genomics
2010, 11:463
(11/13/2010)
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Our new product,
BlastStation-Local64
version 1.0 for
Mac OS X is
released. This
is a specialized
version of
BlastStation-Local
for 64-bit Macs,
such as Mac Pro.
Built-in 64-bit NCBI
Blast+ 2.2.24
performs NCBI Blast+
searches almost
twice as fast as
32-bit NCBI Blast+
and NCBI Blast.
Benchmark tests
results are here.
BlastStation-Local64
also supports large virtual
database to tie up multiple
databases. For
example, it enables blastp
searches over nr.00,
nr.01, nr.02, nr.03,
and nr.04. Please download it
from
here
for
14-day free trial.
(10/12/2010)
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Fungus/Mushroom
Resource and
Research Center,
Tottori University,
Japan purchased
volume licenses of
customized
BlastStation2.
Customized version
of BlastStation2
will be used for the
Blast searches
against the mushroom
gene database
developed in the
Center. This
decision was made
because of the
intuitive manner of
operation, amazing
easy-to-use
interface, and low
customization cost.
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BlastStation-Free
version 1.1 for
Windows is released.
BlastStation-Free
is a
Free Edition
of BlastStation2 with some
limitations.
Please visit
the product
page for
details. (9/22/2010)
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BlastStation-Local
version 1.4 for
Windows is
released. New
features include 1)
Displays sequence by
clicking ID for
local database
without NCBI format
deflines.
2) Exports search
result sequences in FASTA format. 3)
Supports to delete,
backup and restore BlastStation jobs. Please download it
from
here
for
14-day free trial.
(8/8/2010).
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BlastStation
version 2.70 for
Windows is
released. New
features include 1)
Communicates with
the EBI Blast server
using REST
web service instead
of SOAP web service.
2) Exports search
result sequences in
FASTA format. 3)
Supports to delete,
backup and restore BlastStation jobs.
4) Exports search
results faster than
before.
Please download it
from
here.
(7/25/2010).
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BlastStation2 is an All-in-One
solution for BLAST searches.
BLAST is one of the most popular
and widely used Bioinformatics
applications. BlastStation2 supports
NCBI-Blast, WU-Blast2,
and standalone local Blast
searches with the same
easy-to-use interface.
BlastStation automatically
detect and utilizes multi core
processors for fast local Blast
searches. For example,
Macintosh or PC with Core 2 Duo
processor performs local BLAST
searches 50 % faster than before. BlastStation is very effective
interface program that makes
BLAST (Basic
Local
Alignment
Search
Tool)
faster and easier to use.
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BlastStation reads and splits
whole sets of multi-FASTA data, and
then continuously submits each set
of data to the BLAST server.
Search results are displayed in both
bar graph and summary table format
with full Definitions. Summary
tables can be exported in CSV format
and transferred to a spreadsheet
program. Perhaps more
importantly, BlastStation
makes it simple for users to
organize search results. Download
BlastStation now
(a 14-day free trial is available)
and experience the power of
BlastStation. |
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BlastStation2 is available
for Mac OS X and Windows. |
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Supported
Mac OS X: 10.4 Tiger, 10.5
Leopard, 10.6 Snow
Leopard, and 10.7 Lion |
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Supported
Windows: Windows XP, Windows
Vista, and Windows 7 |
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Testimonials: |
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BlastStation
really
makes
NCBI
BLAST
user
friendly.
I
always
felt
it
was
inconvenient
to
only
have
truncated
Definitions
with
search
results.
I
was
delighted
to
see
that
BlastStation
automatically
displayed
full
Definitions
when
creating
tables.
Enabling
the
easy
export
of
data
to
Excel
is
another
helpful
feature.
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Organizing
BLAST
search
results
used
to
be a
nightmare.
Thanks
to
BlastStation,
I
can
now
clearly
see
the
results
from
each
search
job.
The
graphic
display
of
search
results
is
easy
to
grasp.
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Selected List of Our Users: |
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USA |
Baylor College of Medicine,
Brown University,
Columbia University,
Cornell University,
Dartmouth College,
Duke University,
Kansas
State
University,
Harvard University,
Massachusetts
General
Hospital,
Massachusetts Institute of Technology,
National
Institute
of
Health,
National Oceanic and Atmospheric Administration (NOAA),
Princeton University,
Ragon Institute of MGH, MIT and Harvard,
Stanford University,
The Scripps Research Institute,
University
of
California,
Berkeley,
University
of
California,
Irvine,
University
of
California,
Los Angeles,
University
of
California,
San Diego,
University
of
California,
Santa Barbara,
The University of Georgia,
University of Hawaii at Hilo,
University of Illinois at Urbana-Champaign,
University of Kentucky,
University of Washington,
University of Wisconsin-Madison,
Woods Hole Oceanographic Institution |
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Argentina |
CONICET |
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Australia |
CSIRO
(Commonwealth
Scientific
and
Industrial
Research
Organisation),
The University of Melbourne,
The
University
of
Queensland |
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Austria |
Institute
of Molecular Biotechnology |
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Belgium |
Université
catholique
de
Louvain,
Université de Liège,
VIB
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Brazil |
Instituto de Biofísica Carlos Chagas Filho,
Unicamp,
Universidade de São Paulo
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Canada |
Queen's
University
University
of
Calgary,
Université de Sherbrooke
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China |
NanJing
Normal
University,
Nanjing Agricultural University,
National Institute of Biological Sciences, Beijing
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Finland |
University
of
Helsinki |
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France |
Centre national de la recherche scientifique,
Ecole Centrale de Lyon,
Institut de Génétique et Microbiologie,
Institut National de la Santé et de la Recherche Médicale,
National
Institute
for
Agricultural
Research
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Germany |
Bielefeld
University,
Heinrich - Heine University,
LMU Munich,
Max
Planck
Institute
of Biochemistry,
University of Cologne |
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India |
Institute
of
Lifesciences |
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Ireland |
National University of Ireland, Galway |
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Israel |
TransAlgae |
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Italy |
University
of
Padova |
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Japan |
The
University
of Tokyo,
Kyoto
University,
Nagoya
University,
University
of
Tsukuba,
National
Institute
of Polar
Research,
National
Institute
of
Advanced
Industrial
Science
and
Technology,
National Institute for Basic Biology |
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Korea
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Ewha Womans University,
Korea Basic Science Institute,
Korea
Research
Institute
of
Bioscience
&
Biotechnology,
Korea University,
Seoul National University |
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Netherlands |
University
of
Amsterdam,
InteRNA
Technologies
B.V. |
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New
Zealand |
University
of Otago |
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Norway |
Norwegian University of Life Sciences,
Norwegian
School
of
Veterinary
Science,
Norwegian University of Science and Technology,
University of Oslo
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Saudi Arabia |
King Abdullah University of Science and Technology |
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Spain |
University
of
Murcia,
CBMSO |
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Sweden |
Karolinska Institute,
Swedish University of Agricultural Sciences,
Uppsala
University |
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United
Kingdom |
Imperial College London,
Newcastle
University,
University of Cambridge,
University of Oxford
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TM Software, Inc. All rights
reserved.
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